The detailed information of tRNA gene sequence


Sequence ID>SRA1012893
Genome IDSRR020493.473417
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 160
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattttttgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCATCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
acgttatttg
Secondary structure (Cloverleaf model)
>SRA1012893	Met	CAT
                   t      ACCA acgttatttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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