The detailed information of tRNA gene sequence


Sequence ID>SRA1012922
Genome IDSRR020493.484227
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 103
End posion on genome 196
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aaggttttgt
tRNA gene sequence 
GGTCCTGTAGTTTAACGGTAAAACACCCGGCTTATACTCGGCATAGTCTCCAGATTAGAG
AGCGATGTGGGTTCGAATCCCACCGGGACCACCA
Downstream region at tRNA end position 
actttatttt
Secondary structure (Cloverleaf model)
>SRA1012922	Ile	TAT
                   t      ACCA actttatttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C A C C C     A
        A A        A      | | | | |     G
      C     T T T G       G T G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ATAGTCTCCAGATTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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