The detailed information of tRNA gene sequence


Sequence ID>SRA1012927
Genome IDSRR020493.486084
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 218
End posion on genome 141
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttatgattT
tRNA gene sequence 
GGGGCCGATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAG
TCCGCTTGGCTCCATCA
Downstream region at tRNA end position 
ggattttcac
Secondary structure (Cloverleaf model)
>SRA1012927	Ala	GGC
                   T      ATCA ggattttcac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G + T          T G
                    A     T C G C C     A
      G A C        T      | | | | |     G
    C       T C G A       A G C G G     C
    T       +                       T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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