The detailed information of tRNA gene sequence


Sequence ID>SRA1012932
Genome IDSRR020493.488566
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 177
End posion on genome 263
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattatctcg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAGGGGAAACTTTA
TCGAGGGTTCGAATCCCTNTCTCTCCGttt
Downstream region at tRNA end position 
tatattagtt
Secondary structure (Cloverleaf model)
>SRA1012932	Ser	GGA
                   g      Gttt tatattagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     N T C C C     A
      T G A        G        | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGAAACTTTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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