The detailed information of tRNA gene sequence


Sequence ID>SRA1012935
Genome IDSRR020493.489121
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 245
End posion on genome 170
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
taatttactt
tRNA gene sequence 
GGGTCATTAACTCAGTTGGTTTAGAGTGTTACCTTGACAGGGTAGAAGTCACTGGTTCGA
ATCCAGTATGACCCACat
Downstream region at tRNA end position 
attccttttg
Secondary structure (Cloverleaf model)
>SRA1012935	Val	GAC
                   t      ACat attccttttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C A       A C T G G     C
  G         | | | |                 T T
  T         G A G T
    T T A          G     AAGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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