The detailed information of tRNA gene sequence


Sequence ID>SRA1012945
Genome IDSRR020494.6428
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 48
End posion on genome 124
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttaatattt
tRNA gene sequence 
CGGGGCGTAGCGTAGTCCGGTTAGCGCACCTCGTTTGGGACGAGGGGTCGCAGGTTCAAA
TCCTGCCGCCCCGACAA
Downstream region at tRNA end position 
aattttagtt
Secondary structure (Cloverleaf model)
>SRA1012945	Pro	TGG
                   t      ACAA aattttagtt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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