The detailed information of tRNA gene sequence


Sequence ID>SRA1012971
Genome IDSRR020494.27341
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 43
End posion on genome 124
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatcgtagca
tRNA gene sequence 
GACACTTTGGCCGAGTGGTTAAGGCGCTGGCCTGCTAAGCCAGTGGGTTCGCCCGCGAGA
GTTCGAATCTCTCAGGTGTCGCtc
Downstream region at tRNA end position 
ctttttgcgc
Secondary structure (Cloverleaf model)
>SRA1012971	Ser	GCT
                   a      GCtc ctttttgcgc
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGTTCGCCCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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