The detailed information of tRNA gene sequence


Sequence ID>SRA1012975
Genome IDSRR020494.31130
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 27
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaattaaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGGCAAGGATGCAAGTCCT
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ctaaccctaa
Secondary structure (Cloverleaf model)
>SRA1012975	Ser	TGA
                   a      GCCA ctaaccctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CAAGGATGCAAGTCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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