The detailed information of tRNA gene sequence


Sequence ID>SRA1013011
Genome IDSRR020494.64739
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 56
End posion on genome 127
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
taaatgattg
tRNA gene sequence 
GGGGTGGTAACTCATTGGTAGAGTATCTCTGTAGCGAAGAGAAAGTAGTTGGTTCGATTC
CACCCCACCCTCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1013011	Ala	AGC
                   g      Cnnn nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T T
                    T     C C A C C     A
        T A        A      |   | | |     G
      T     C T C A       G T T G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     AAGTA
                    T - A
                    C - G
                    T - A
                    C - G
                    T - A
                  G       A
                  T       G
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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