The detailed information of tRNA gene sequence


Sequence ID>SRA1013047
Genome IDSRR020494.101079
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 36
End posion on genome 110
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acaacgattT
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGTAGAGCACCTGCATGGCATGCAGGTGGTCAGCGGTTCAAGT
CCGCTTGGCTCCATag
Downstream region at tRNA end position 
gaattttnnn
Secondary structure (Cloverleaf model)
>SRA1013047	Ala	GGC
                   T      ATag gaattttnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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