The detailed information of tRNA gene sequence


Sequence ID>SRA1013055
Genome IDSRR020494.111626
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 90
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaatcttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTCAGAGCGCACGGCTCATATTCGTGATGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1013055	Met	CAT
                   t      ACCn nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     ATGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G + T
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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