The detailed information of tRNA gene sequence


Sequence ID>SRA1013082
Genome IDSRR020514.2365
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 23
End posion on genome 99
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
taccacacgt
tRNA gene sequence 
GGCGCATTCGTCTAGCGGCCTAGGACACCGCCCTCTCAAGGCGGAGATCACGGGTTCGAA
TCCCGTATGCGNTACCA
Downstream region at tRNA end position 
tgccctttct
Secondary structure (Cloverleaf model)
>SRA1013082	Glu	CTC
                   t      ACCA tgccctttct
                     G + T
                     G   N
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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