The detailed information of tRNA gene sequence


Sequence ID>SRA1013164
Genome IDSRR020514.53271
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 236
End posion on genome 161
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tattgttttt
tRNA gene sequence 
GCCGGAATAGCTCAATTGGCAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCAATT
CCCTCTTCCGGCACCA
Downstream region at tRNA end position 
ccttacaaaa
Secondary structure (Cloverleaf model)
>SRA1013164	Thr	TGT
                   t      ACCA ccttacaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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