The detailed information of tRNA gene sequence


Sequence ID>SRA1013170
Genome IDSRR020514.55009
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 209
End posion on genome 132
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catactgtaa
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCACCGGAATCATAATCCGGGTGTCGGGGGGTTCAA
GTCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ataattccaa
Secondary structure (Cloverleaf model)
>SRA1013170	Met	CAT
                   a      ACCA ataattccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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