The detailed information of tRNA gene sequence


Sequence ID>SRA1013176
Genome IDSRR020514.56992
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 178
End posion on genome 103
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataagctact
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aacgaatgat
Secondary structure (Cloverleaf model)
>SRA1013176	Trp	CCA
                   t      GCCA aacgaatgat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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