The detailed information of tRNA gene sequence


Sequence ID>SRA1013184
Genome IDSRR020514.60844
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 11
End posion on genome 103
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ttaaatcatt
tRNA gene sequence
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTACGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position
tagattatct
Secondary structure (Cloverleaf model)
>SRA1013184	Ser	GCT
                   t      GCCA tagattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTACGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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