The detailed information of tRNA gene sequence


Sequence ID>SRA1013277
Genome IDSRR020514.113575
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 126
End posion on genome 31
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggtattatt
tRNA gene sequence 
GGGAATGATTGCGCGGCTGGTGCCCGCCGCGGTCTTCAAAACCGTTGTCCCGGTGCTGAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaggaatc
Secondary structure (Cloverleaf model)
>SRA1013277	SeC	TCA
                   t      GCCA tttaggaatc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       C G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGTCCCGGTGCTGAATCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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