The detailed information of tRNA gene sequence


Sequence ID>SRA1013335
Genome IDSRR020514.149343
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 239
End posion on genome 150
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taccgatctc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGACGAAAGCGCTGGTCTCGAAAACCAGTATAGGGGCAACTCTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
cgcatggact
Secondary structure (Cloverleaf model)
>SRA1013335	Ser	CGA
                   c      GCCA cgcatggact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    A       A A G C
      C G A        G     TATAGGGGCAACTCTATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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