The detailed information of tRNA gene sequence


Sequence ID>SRA1013391
Genome IDSRR020514.169429
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 170
End posion on genome 244
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtcggtttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGAGTTCAAG
TCTCTCCTCCGCTACtg
Downstream region at tRNA end position 
attaaaacgt
Secondary structure (Cloverleaf model)
>SRA1013391	Met	CAT
                   t      ACtg attaaaacgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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