The detailed information of tRNA gene sequence


Sequence ID>SRA1013445
Genome IDSRR023396.50604
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 190
End posion on genome 266
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaaagacat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCT
Downstream region at tRNA end position 
attttttnnn
Secondary structure (Cloverleaf model)
>SRA1013445	Met	CAT
                   t      ACCT attttttnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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