The detailed information of tRNA gene sequence


Sequence ID>SRA1013447
Genome IDSRR023396.57316
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 227
End posion on genome 141
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aggtaagtgT
tRNA gene sequence 
GCCGAAGTGGCGGAATGGTAGACGCGGCAGTCTCAAAAACTGTTGGAGGGCAACCTCCGT
GTCGGTTCGAGTCCGACCTTCGGCATta
Downstream region at tRNA end position 
tagatagcaa
Secondary structure (Cloverleaf model)
>SRA1013447	Leu	CAA
                   T      ATta tagatagcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T C G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGGAGGGCAACCTCCGT
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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