The detailed information of tRNA gene sequence


Sequence ID>SRA1013449
Genome IDSRR023396.58716
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 258
End posion on genome 184
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnaac
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position 
ttcttttata
Secondary structure (Cloverleaf model)
>SRA1013449	Pro	CGG
                   c      Attt ttcttttata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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