The detailed information of tRNA gene sequence


Sequence ID>SRA1013461
Genome IDSRR023396.71548
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 231
End posion on genome 157
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
tcattanaac
tRNA gene sequence
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position
ttcttttata
Secondary structure (Cloverleaf model)
>SRA1013461	Pro	CGG
                   c      Attt ttcttttata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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