The detailed information of tRNA gene sequence


Sequence ID>SRA1013463
Genome IDSRR023396.72570
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 98
End posion on genome 169
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttttttggat
tRNA gene sequence 
GGGCCTGTAGTATAATGGTAGAACACCGCTCTCACACGGCGGGGGTTCCGGTTCGAATCC
GGGCAGGCCCACtt
Downstream region at tRNA end position 
ctttagtgtt
Secondary structure (Cloverleaf model)
>SRA1013463	Val	CAC
                   t      ACtt ctttagtgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
        A A        A      + | | | |     G
      T     T A T G       T C C G G     C
      G     +   | |                 T T
      G     G A A C
        T A        A     GGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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