The detailed information of tRNA gene sequence


Sequence ID>SRA1013479
Genome IDSRR023396.92137
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 75
End posion on genome 151
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
ccttttcatg
tRNA gene sequence
GTGAGCGTAGCTCAACTGGTTAGAGCATCGGACTGTGGATCCGAAGGTTGGGGGTTCGAG
ACCCCTCGCTCACCCCA
Downstream region at tRNA end position
ccctaaaccc
Secondary structure (Cloverleaf model)
>SRA1013479	His	GTG
                   g      CCCA ccctaaaccc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          A G
                    T     T C C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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