The detailed information of tRNA gene sequence


Sequence ID>SRA1013480
Genome IDSRR023396.92605
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 73
End posion on genome 147
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
aggtattcat
tRNA gene sequence
TCCCCGGTAGCTCAATGGTAGAGTGGGCGGCTGTTAACCGCTTGGTTGCAGGTTCGAGTC
CTGCCCGGGGAGCCA
Downstream region at tRNA end position
agtctgaggg
Secondary structure (Cloverleaf model)
>SRA1013480	Asn	GTT
                   t      GCCA agtctgaggg
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | +                 T T
      G     G A G T
        T A        G     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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