The detailed information of tRNA gene sequence


Sequence ID>SRA1013495
Genome IDSRR023396.117411
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 255
End posion on genome 179
Amino Acid Unknown
Anticodon GNT
Upstream region at tRNA start position 
taaccgccaa
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTTAGAGCACGGTCCTGNTAANACCGGGGTCTGTGGTTCGAG
TCCACAATGGCCCACCA
Downstream region at tRNA end position 
taatgtacaa
Secondary structure (Cloverleaf model)
>SRA1013495	Unknown	GNT
                   a      ACCA taatgtacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     A C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    T - A
                    C   N
                  C       A
                  T       A
                    G N T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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