The detailed information of tRNA gene sequence


Sequence ID>SRA1013502
Genome IDSRR023396.130911
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 137
End posion on genome 66
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atttttggat
tRNA gene sequence 
GGGCCTGTAGTATAATGGTAGAACACCGCTCTCACACGGCGGGGGTTCCGGTTCGAATCC
GGGCAGGCCCACtt
Downstream region at tRNA end position 
ctttagtgtg
Secondary structure (Cloverleaf model)
>SRA1013502	Val	CAC
                   t      ACtt ctttagtgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
        A A        A      + | | | |     G
      T     T A T G       T C C G G     C
      G     +   | |                 T T
      G     G A A C
        T A        A     GGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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