The detailed information of tRNA gene sequence


Sequence ID>SRA1013508
Genome IDSRR023396.138667
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 63
End posion on genome 137
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
gtttgattat
tRNA gene sequence
GCGCCTGTAGCTCAGCTGGATAGAGCGCCGGACTTCGAATCCGATGGTCGGAGGTTCGAA
TCCTCTCAGGCGTGCtt
Downstream region at tRNA end position
aacatatatg
Secondary structure (Cloverleaf model)
>SRA1013508	Arg	TCG
                   t      GCtt aacatatatg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     TGGTC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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