The detailed information of tRNA gene sequence


Sequence ID>SRA1013509
Genome IDSRR023396.141165
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 12
End posion on genome 88
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
cgcaaacagg
tRNA gene sequence
GGGCCGGTCGTCTAGCTCGGTAGGACATTGGCTTTACGAGCCAAAGGTCGCTGGTTCAAG
TCCGGCCCGGCCCACCA
Downstream region at tRNA end position
taacaagcct
Secondary structure (Cloverleaf model)
>SRA1013509	Val	TAC
                   g      ACCA taacaagcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      C G A        C      | | + | |     A
    T       T C T G       G C T G G     C
    C       + | | |                 T T
    G       G G A C
      G T A        A     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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