The detailed information of tRNA gene sequence


Sequence ID>SRA1013515
Genome IDSRR023396.149599
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 160
End posion on genome 89
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
atttttggat
tRNA gene sequence
GGGCCTGTAGTATAATGGTAGAACACCGCTCTCACACGGCGGGGGTTCCGGTTCGAATCC
GGGCAGGCCCACtt
Downstream region at tRNA end position
ctttagtgtt
Secondary structure (Cloverleaf model)
>SRA1013515	Val	CAC
                   t      ACtt ctttagtgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
        A A        A      + | | | |     G
      T     T A T G       T C C G G     C
      G     +   | |                 T T
      G     G A A C
        T A        A     GGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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