The detailed information of tRNA gene sequence


Sequence ID>SRA1013525
Genome IDSRR023396.164734
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 197
End posion on genome 270
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
cgcaaacagg
tRNA gene sequence
GGGCCGGTCGTCTAGCTCGGTAGGACATTGGCTTTACGAGCCAAAGGTCGCTGGTTCAAG
TCCGGCCCGGCCCAnnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1013525	Val	TAC
                   g      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      C G A        C      | | + | |     A
    T       T C T G       G C T G G     C
    C       + | | |                 T T
    G       G G A C
      G T A        A     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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