The detailed information of tRNA gene sequence


Sequence ID>SRA1013531
Genome IDSRR023396.168737
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 50
End posion on genome 124
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gtttgattat
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCGCCGGACTTCGAATCCGATGGTCGGAGGTTCGAA
TCCTCTCAGGCGTGCtt
Downstream region at tRNA end position 
aacatatatg
Secondary structure (Cloverleaf model)
>SRA1013531	Arg	TCG
                   t      GCtt aacatatatg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     TGGTC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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