The detailed information of tRNA gene sequence


Sequence ID>SRA1013532
Genome IDSRR023396.174685
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 55
End posion on genome 129
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gatacccttT
tRNA gene sequence 
GCCGCGGTAACTCAGTTGGGAGAGTGCAAGACTGAAGATCTTGAAGTCGCCGGTTCAAGC
CCGGCCCGCGGCATtt
Downstream region at tRNA end position 
tcatatctag
Secondary structure (Cloverleaf model)
>SRA1013532	Phe	GAA
                   T      ATtt tcatatctag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C G G C C     A
      T G A        A      | | | | |     A
    T       C T C A       G C C G G     C
    G       | | | |                 T T
    G       G A G T
      G A          G     AAGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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