The detailed information of tRNA gene sequence


Sequence ID>SRA1013536
Genome IDSRR023396.178714
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 169
End posion on genome 81
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttctagaccT
tRNA gene sequence 
GCCGGAGTGGCGAAATTGGTAGACGCACTGGATTCAAAATCCAGCGGAACGTTTAGTTCC
ATGTGGGTTCGAGTCCCTCCTCCGGCATac
Downstream region at tRNA end position 
cgttcctttg
Secondary structure (Cloverleaf model)
>SRA1013536	Leu	CAA
                   T      ATac cgttcctttg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    T       A G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGAACGTTTAGTTCCAT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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