The detailed information of tRNA gene sequence


Sequence ID>SRA1013538
Genome IDSRR023396.179012
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 61
End posion on genome 137
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaaagcaagt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCAGGTAGCGCACCTGAATGGGGTTCAGGTGGTCGCCGGTTCAAA
TCCGGCCACCCCGACCA
Downstream region at tRNA end position 
tagataggag
Secondary structure (Cloverleaf model)
>SRA1013538	Pro	GGG
                   t      ACCA tagataggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C C G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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