The detailed information of tRNA gene sequence


Sequence ID>SRA1013578
Genome IDSRR023396.238056
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 180
End posion on genome 253
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
taaaattctg
tRNA gene sequence 
GCGGGATTAGTATAGTGGTAGTACGCAACCTTCCCAAGGTTGATGCGCCAGTTCGATCCT
GGTATCCCGCTCAA
Downstream region at tRNA end position 
gtattctcta
Secondary structure (Cloverleaf model)
>SRA1013578	Gly	CCC
                   g      TCAA gtattctcta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T G G T C     A
        G A        A      + | | | |     G
      T     T A T G       G C C A G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     ATGC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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