The detailed information of tRNA gene sequence


Sequence ID>SRA1013601
Genome IDSRR023396.277722
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 179
End posion on genome 255
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agcactgaac
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGTGCTTGCTTGACATGCAAGAGGTCACTGGTTCGAT
CCCAGTATCGCCCACCA
Downstream region at tRNA end position 
tgatagagga
Secondary structure (Cloverleaf model)
>SRA1013601	Val	GAC
                   c      ACCA tgatagagga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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