The detailed information of tRNA gene sequence


Sequence ID>SRA1013604
Genome IDSRR023396.280991
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 119
End posion on genome 44
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attagaaaac
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGAAGAGCAACCGGCTCATAACCGGTCGGTCCCTGGTTCGAGT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aaaaactaat
Secondary structure (Cloverleaf model)
>SRA1013604	Met	CAT
                   c      ACCA aaaaactaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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