The detailed information of tRNA gene sequence


Sequence ID>SRA1013612
Genome IDSRR023396.291943
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 112
End posion on genome 189
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gttggtcggt
tRNA gene sequence 
GGGTCCGTAGCTCAGCAAGGTCAGAGCGGTGGCCTCTTAAGCCATTGGCCGAGGGTTCGA
ATCCCTCCGGACCCGCCA
Downstream region at tRNA end position 
gttctcttga
Secondary structure (Cloverleaf model)
>SRA1013612	Lys	CTT
                   t      GCCA gttctcttga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    A C G A        A      | | | | |     G
  A         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGCC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK