The detailed information of tRNA gene sequence


Sequence ID>SRA1013617
Genome IDSRR023396.302879
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 33
End posion on genome 108
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
agctaaatgc
tRNA gene sequence
GGGCCGTTAGCTCAGTTGGCAGAGCACCTGACTTTTAATCAGGGTGTCACAGGTTCGAGA
CCTGTACGGCCTACCA
Downstream region at tRNA end position
ttttttgagg
Secondary structure (Cloverleaf model)
>SRA1013617	Lys	TTT
                   c      ACCA ttttttgagg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          A G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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