The detailed information of tRNA gene sequence


Sequence ID>SRA1013641
Genome IDSRR023396.330074
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 48
End posion on genome 134
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ggcgcatggg
tRNA gene sequence 
GCCGAAGTGGCGGAACAGGCAGACGCGACGGTCTCAAAAACCGTTGAGGGCAACCTCATG
TGGGTTCGAGTCCCACCTTCGGCACCT
Downstream region at tRNA end position 
ctattatata
Secondary structure (Cloverleaf model)
>SRA1013641	Leu	CAA
                   g      ACCT ctattatata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    A       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGGCAACCTCAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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