The detailed information of tRNA gene sequence


Sequence ID>SRA1013643
Genome IDSRR023396.334108
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 11
End posion on genome 85
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtcctgtga
tRNA gene sequence 
GGGCCGGTAGCTCAGTTTGGCTGGAGCGTTCGGCTGATAACCGAAAGGTCGAGAGTTCAA
ATCTCTCCCGGCCCAttt
Downstream region at tRNA end position 
ttccatagtt
Secondary structure (Cloverleaf model)
>SRA1013643	Ile	GAT
                   a      Attt ttccatagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T T G A        A      | | | | |     A
  T         C T C G       G A G A G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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