The detailed information of tRNA gene sequence


Sequence ID>SRA1013650
Genome IDSRR023396.343116
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 97
End posion on genome 172
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttgagggtt
tRNA gene sequence 
GGGCGGGTAGATCAGCTTGGAATGATCGCGGCGTTGGCATCGCCGAGGTCGCGGGTTCAA
ATCCCGCCCCGTCCACtg
Downstream region at tRNA end position 
tcaacgaacc
Secondary structure (Cloverleaf model)
>SRA1013650	Ala	GGC
                   t      ACtg tcaacgaacc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        A      | | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK