The detailed information of tRNA gene sequence


Sequence ID>SRA1013652
Genome IDSRR023396.348599
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 192
End posion on genome 118
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
tcattagaac
tRNA gene sequence
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position
ttcttttata
Secondary structure (Cloverleaf model)
>SRA1013652	Pro	CGG
                   c      Attt ttcttttata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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