The detailed information of tRNA gene sequence


Sequence ID>SRA1013663
Genome IDSRR023396.361708
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 22
End posion on genome 98
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaaagacat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
ttttttccca
Secondary structure (Cloverleaf model)
>SRA1013663	Met	CAT
                   t      ACCA ttttttccca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK