The detailed information of tRNA gene sequence


Sequence ID>SRA1013679
Genome IDSRR023396.380317
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 151
End posion on genome 66
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctataatgt
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCCTATCAGGCGCGCCTGGAGAGCGCGTGTCGGGTTCCCGACC
GTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
tgctttcttt
Secondary structure (Cloverleaf model)
>SRA1013679	Ser	GGA
                   t      GCtc tgctttcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C T A        G     TGTCGGGTTCCCGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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