The detailed information of tRNA gene sequence


Sequence ID>SRA1013688
Genome IDSRR023396.390291
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 65
End posion on genome 137
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tcagccgaca
tRNA gene sequence 
GAGCCGTTAGCTCAGTTGGTAGAGCATCGGCCTTTTAAGCCGAGGGTCGCAGGTTCGACT
CCTGCACGGCTCAtcc
Downstream region at tRNA end position 
ggtccccata
Secondary structure (Cloverleaf model)
>SRA1013688	Lys	TTT
                   a      Atcc ggtccccata
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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