The detailed information of tRNA gene sequence


Sequence ID>SRA1013689
Genome IDSRR023396.390956
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 165
End posion on genome 241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
acaaagacat
tRNA gene sequence
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position
ttttttcccc
Secondary structure (Cloverleaf model)
>SRA1013689	Met	CAT
                   t      ACCA ttttttcccc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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