The detailed information of tRNA gene sequence


Sequence ID>SRA1013695
Genome IDSRR023396.394028
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 90
End posion on genome 14
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
atcgttttaT
tRNA gene sequence
GAGGCTGTAGCTCAGCCTGGTTAGAGCACTACTCTGATAAGGTAGGGGTCCACGGTTCAA
ATCCGTGCAGCCTCATat
Downstream region at tRNA end position
tcaatatagt
Secondary structure (Cloverleaf model)
>SRA1013695	Ile	GAT
                   T      ATat tcaatatagt
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G T G C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C A C G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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